STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY71291.1Peptidase S24-like domain protein; KEGG: cya:CYA_1992 1.0e-14 S24 family peptidase K01362; Psort location: Cytoplasmic, score: 8.96. (231 aa)    
Predicted Functional Partners:
EHY71290.1
Hypothetical protein.
     
 0.555
EHY69312.1
Extensin-like protein; Locus tag in AE006468 is STM0381.
  
     0.520
EHY69042.1
Hypothetical protein; KEGG: efa:EF0685 0.0085 rotamase family protein; K07533 foldase protein PrsA; locus tag in AE006468 is STM0080.
  
     0.519
EHY71289.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.482
ttrS
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: stm:STM1386 1.2e-297 ttrS; sensory histidine kinase K00873; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1386; ttrS.
  
     0.480
nifJ
KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ.
  
 
 0.470
nadR
Nicotinamide-nucleotide adenylyltransferase; Locus tag in AE006468 is STM4580; nadR.
   
 
  0.454
ttrC
Polysulfide reductase, NrfD; KEGG: afu:AF2386 5.2e-06 molybdopterin oxidoreductase, membrane subunit; K00185 molybdopterin oxidoreductase, membrane subunit; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1384; ttrC.
  
     0.430
EHY68093.1
Hypothetical protein; KEGG: bja:blr3367 6.4e-06 cellulase; K01179 endoglucanase; locus tag in AE006468 is STM3799; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.419
EHY71283.1
KEGG: sew:SeSA_A4447 2.3e-106 phage N-6-adenine-methyltransferase.
  
     0.415
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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