STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY71395.1Aminotransferase AlaT; KEGG: sei:SPC_1377 4.6e-218 yfbQ; aspartate aminotransferase; K10907 aminotransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2331; yfbQ. (404 aa)    
Predicted Functional Partners:
ilvD
KEGG: seh:SeHA_C4235 0. ilvD; dihydroxy-acid dehydratase K01687; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3904; ilvD; Belongs to the IlvD/Edd family.
   
 
 0.993
aspC
Aminotransferase, class I/II; KEGG: spq:SPAB_02515 1.6e-208 aromatic amino acid aminotransferase; K00813 aspartate aminotransferase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM0998; aspC.
   
 0.992
argA
Amino-acid N-acetyltransferase; KEGG: stt:t2900 2.1e-229 argA; N-acetylglutamate synthase K00619; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2992; argA; Belongs to the acetyltransferase family. ArgA subfamily.
  
 
 0.991
EHY67972.1
Aminotransferase, class I/II; KEGG: sty:STY4133 6.0e-225 avtA; valine--pyruvate transaminase K00835; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3665; avtA.
     
 0.991
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.991
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.
  
 
 0.990
gdhA_2
Glu/Leu/Phe/Val dehydrogenase, dimerization domain protein; KEGG: seh:SeHA_C1426 6.8e-240 gdhA; glutamate dehydrogenase; K00262 glutamate dehydrogenase (NADP+); Psort location: OuterMembrane, score: 9.92; locus tag in AE006468 is STM1299; gdhA; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.990
nifJ
KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ.
  
 
 0.981
EHY68918.1
Class II glutamine amidotransferase; KEGG: stt:t3247 0. gltB; glutamate synthase subunit alpha K00265; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3330; gltB.
  
 
 0.947
EHY70079.1
Isocitrate dehydrogenase, NADP-dependent; KEGG: spq:SPAB_02276 6.2e-223 isocitrate dehydrogenase; K00031 isocitrate dehydrogenase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1238; icdA.
   
 0.927
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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