STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lysP_1Putative lysine-specific permease; KEGG: eci:UTI89_C0120 2.0e-59 aroP; aromatic amino acid transporter K11734; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2357. (468 aa)    
Predicted Functional Partners:
gadC
KEGG: sds:SDEG_0016 3.9e-07 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2359.
 
  
 0.730
EHY69915.1
Tat pathway signal sequence; KEGG: sds:SDEG_0016 5.7e-21 amino acid permease; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.709
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.693
EHY71425.1
Alanine racemase protein; KEGG: bcg:BCG9842_B3236 6.2e-05 dal2; alanine racemase K01775; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2358.
       0.588
EHY71427.1
KEGG: sty:STY2590 5.5e-254 putative amino acid decarboxylase; K01586 diaminopimelate decarboxylase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2360.
       0.453
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.