STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY71491.1Rhs element Vgr protein; KEGG: rso:RS01958 1.8e-24 RSp0750; putative VGR-related protein; K01644 citrate lyase subunit beta. (703 aa)    
Predicted Functional Partners:
tssG
Type VI secretion protein, VC_A0111 family; KEGG: vfi:VF_1000 4.0e-29 quinoprotein dehydrogenase K11895.
 
 
 0.893
tssB
Type VI secretion protein, VC_A0107 family; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.857
EHY69228.1
Type IV / VI secretion system protein, DotU family; KEGG: cco:CCC13826_1179 6.9e-18 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) K11892.
 
  
 0.843
EHY68679.1
Hypothetical protein.
 
  
 0.830
vasA
Type VI secretion protein, VC_A0110 family; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.825
tssE
Type VI secretion system lysozyme protein; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.823
tssC
Type VI secretion protein, EvpB/VC_A0108 family; KEGG: bpm:BURPS1710b_A0534 8.4e-155 hypothetical protein K11900.
 
  
 0.820
EHY68678.1
Hypothetical protein; KEGG: bpm:BURPS1710b_A0534 2.3e-21 hypothetical protein K11900.
 
  
 0.820
EHY69229.1
Type VI secretion protein, VC_A0114 family; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.814
icmF
Type VI secretion protein IcmF; Psort location: CytoplasmicMembrane, score: 9.82.
 
  
 0.800
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.