STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY68461.1LysR substrate binding domain protein; KEGG: rlt:Rleg2_3391 5.4e-41 transcriptional regulator, LysR family; locus tag in AE006468 is STM2912; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
EHY68460.1
Transporter, major facilitator family protein; KEGG: fgr:FG00711.1 2.0e-12 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2911.
 
   
 0.922
EHY70461.1
Putative inner membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1591; ydcZ.
      
 0.784
EHY71348.1
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 6.7e-20 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2281; Belongs to the LysR transcriptional regulatory family.
  
     0.755
EHY70513.1
LysR substrate binding domain protein; KEGG: pmy:Pmen_2204 9.7e-10 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM1625; ydcI; Belongs to the LysR transcriptional regulatory family.
  
     0.723
hcaR
LysR substrate binding domain protein; KEGG: shn:Shewana3_3435 1.5e-20 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3121; Belongs to the LysR transcriptional regulatory family.
  
     0.718
hdfR
Transcriptional regulator, LysR family; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.
  
     0.659
tdcA
LysR substrate binding domain protein; KEGG: mmw:Mmwyl1_3712 4.4e-12 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3245; tdcA; Belongs to the LysR transcriptional regulatory family.
  
     0.635
EHY68459.1
Hypothetical protein; Locus tag in AE006468 is STM2910.
       0.492
cysB
Cys regulon transcriptional activator CysB; KEGG: spe:Spro_4684 1.1e-09 LysR family transcriptional regulator; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1713; cysB; Belongs to the LysR transcriptional regulatory family.
  
     0.445
qseD
LysR substrate binding domain protein; Locus tag in AE006468 is STM4511; yjiE; Belongs to the LysR transcriptional regulatory family.
  
    0.434
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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