STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY68590.1Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEI0058 4.6e-11 extracellular serine protease. (391 aa)    
Predicted Functional Partners:
EHY68589.1
Hypothetical protein.
       0.675
EHY71492.1
RHS repeat-associated core domain protein.
  
    0.546
ydgC
GlpM protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1476; ydgC.
  
     0.534
EHY71166.1
Fimbrial usher protein; KEGG: bpl:BURPS1106A_1910 1.9e-49 fimbrial usher protein K07347; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM2150; stcC.
  
    0.486
EHY69472.1
Hypothetical protein; Psort location: OuterMembrane, score: 9.52.
   
    0.465
EHY71497.1
IS1 transposase.
  
     0.446
EHY70952.1
Hypothetical protein.
  
     0.432
cptA
Arylsulfatase; KEGG: ecf:ECH74115_5415 4.2e-288 hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM4118; yijP.
  
     0.432
EHY69162.1
Ferrichrome-iron receptor FhuA; Locus tag in AE006468 is STM0191; fhuA.
  
 
 
 0.429
EHY68588.1
Transcriptional regulator, AraC family; KEGG: cbb:CLD_0121 1.5e-06 methylphosphotriester-DNA alkyltransferase.
       0.421
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.