Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY68754.1 | exbB | SEHO0A_03248 | SEHO0A_03247 | Hypothetical protein; Locus tag in AE006468 is STM3160. | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | 0.809 |
EHY68754.1 | exbD | SEHO0A_03248 | SEHO0A_03246 | Hypothetical protein; Locus tag in AE006468 is STM3160. | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | 0.809 |
EHY68754.1 | metC | SEHO0A_03248 | SEHO0A_03249 | Hypothetical protein; Locus tag in AE006468 is STM3160. | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | 0.536 |
exbB | EHY68754.1 | SEHO0A_03247 | SEHO0A_03248 | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | Hypothetical protein; Locus tag in AE006468 is STM3160. | 0.809 |
exbB | exbD | SEHO0A_03247 | SEHO0A_03246 | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | 0.999 |
exbB | metC | SEHO0A_03247 | SEHO0A_03249 | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | 0.536 |
exbD | EHY68754.1 | SEHO0A_03246 | SEHO0A_03248 | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | Hypothetical protein; Locus tag in AE006468 is STM3160. | 0.809 |
exbD | exbB | SEHO0A_03246 | SEHO0A_03247 | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | 0.999 |
exbD | metC | SEHO0A_03246 | SEHO0A_03249 | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | 0.536 |
metC | EHY68754.1 | SEHO0A_03249 | SEHO0A_03248 | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | Hypothetical protein; Locus tag in AE006468 is STM3160. | 0.536 |
metC | exbB | SEHO0A_03249 | SEHO0A_03247 | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | TonB-system energizer ExbB; KEGG: hip:CGSHiEE_01075 4.5e-21 long-chain-fatty-acid--CoA ligase K03562; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3159; exbB. | 0.536 |
metC | exbD | SEHO0A_03249 | SEHO0A_03246 | Cystathionine beta-lyase; KEGG: sea:SeAg_B3335 3.0e-207 metC; cystathionine beta-lyase K01760; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3161; metC. | TonB system transport protein ExbD; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3158; exbD. | 0.536 |