STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY68836.1Hypothetical protein; Locus tag in AE006468 is STM3231; yqjK. (99 aa)    
Predicted Functional Partners:
EHY68835.1
Putative inner membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3230; yqjE.
 
  
 0.977
elaB_1
Hypothetical protein; KEGG: pfo:Pfl01_3969 5.5e-09 vesicle-fusing ATPase; locus tag in AE006468 is STM3229; yqjD.
 
    0.965
yqjC
Putative protein YqjC; KEGG: nam:NAMH_0317 1.7e-05 putative H+-transporting two-sector ATPase, B/B' subunit; K02109 F-type H+-transporting ATPase subunit b; locus tag in AE006468 is STM3228; yqjC.
 
    0.861
osmE
SmpA / OmlA family protein; Locus tag in AE006468 is STM1311; osmE.
  
    0.780
ompX
Hypothetical protein; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0833; ompX.
  
     0.774
atpI
KEGG: stt:t3647 7.4e-37 atpI; F0F1 ATP synthase subunit I K02116; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3872; atpI.
  
     0.773
EHY70824.1
Hypothetical protein; Locus tag in AE006468 is STM1873.
  
     0.771
SBOV20081
Hypothetical protein; Locus tag in AE006468 is STM1949; yecF.
  
     0.770
ygdR_2
Hypothetical protein; Locus tag in AE006468 is STM2983; ygdI.
  
     0.767
EHY68101.1
Hypothetical protein; Locus tag in AE006468 is STM3810; yidQ.
  
     0.763
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.