STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhaHPutative inner membrane protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3234; yhaH. (121 aa)    
Predicted Functional Partners:
EHY68838.1
Glutathione S-transferase protein; KEGG: ebd:ECBD_0637 5.0e-173 glutathione transferase K07393; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3233; yqjG.
       0.548
yffB
Transcriptional regulator, Spx/MgsR family; KEGG: bme:BMEI1557 4.0e-29 arsenate reductase K00540; locus tag in AE006468 is STM2482; yffB; Belongs to the ArsC family.
   
  
 0.442
EHY68276.1
Carboxymethylenebutenolidase; KEGG: sei:SPC_4075 2.1e-135 ysgA; putative hydrolase; K01061 carboxymethylenebutenolidase; locus tag in AE006468 is STM3967; dlhH.
      
 0.410
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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