STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY68891.1Integral membrane protein DUF6; Psort location: CytoplasmicMembrane, score: 10.00. (321 aa)    
Predicted Functional Partners:
obgE
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
  
    0.858
EHY69728.1
Arylsulfatase; KEGG: ecm:EcSMS35_0839 1.6e-240 sulfatase family protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0834; ybiP.
  
     0.618
nlpE
Lipoprotein NlpE family protein; Psort location: OuterMembrane, score: 9.92.
  
     0.598
rpmA
Ribosomal protein L27; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM3303; rpmA; Belongs to the bacterial ribosomal protein bL27 family.
     
 0.577
mtr
Low affinity tryptophan permease; KEGG: hiq:CGSHiGG_06840 1.6e-80 surE; stationary phase survival protein SurE K03835; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3279; mtr.
  
     0.542
ytfE
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions.
  
     0.466
EHY68893.1
Polyprenyl synthetase; KEGG: sec:SC3243 1.2e-201 ispB; octaprenyl diphosphate synthase; K02523 octaprenyl-diphosphate synthase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3305; ispB; Belongs to the FPP/GGPP synthase family.
    
  0.459
EHY71283.1
KEGG: sew:SeSA_A4447 2.3e-106 phage N-6-adenine-methyltransferase.
  
     0.452
frdC
Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
  
     0.444
SBOV01421
KEGG: azo:azo2324 7.5e-20 putative polysaccharide deacetylase; locus tag in AE006468 is STM0179; yadE.
  
     0.442
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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