STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aaeBPutative P-hydroxybenzoic acid efflux pump subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family. (657 aa)    
Predicted Functional Partners:
aaeA
Efflux transporter, RND family, MFP subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.976
aaeX
Putative protein AaeX; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM3366; yhcR.
 
    0.953
tsx
Nucleoside-specific channel-forming protein Tsx; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0413; tsx.
  
     0.728
ompX
Hypothetical protein; Psort location: OuterMembrane, score: 10.00; locus tag in AE006468 is STM0833; ompX.
  
     0.722
yciC
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1734; yciC.
  
     0.722
EHY67692.1
Hypothetical protein; Locus tag in AE006468 is STM4082; yiiQ.
  
     0.702
atpI
KEGG: stt:t3647 7.4e-37 atpI; F0F1 ATP synthase subunit I K02116; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3872; atpI.
  
     0.685
tamB
Hypothetical protein; Locus tag in AE006468 is STM4410; ytfN.
  
     0.681
SBOV28261
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2801; ygaC.
  
     0.677
yhcO
Hypothetical protein; Locus tag in AE006468 is STM3363; yhcO.
 
     0.666
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.