STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67925.1AsmA family protein; Locus tag in AE006468 is STM3610; yhjG. (686 aa)    
Predicted Functional Partners:
EHY68055.1
AsmA family protein; Locus tag in AE006468 is STM3748; yicH.
      
 0.867
EHY70536.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1646; ydbH.
      
 0.830
EHY71138.1
AsmA family protein; Locus tag in AE006468 is STM2120; asmA.
      
 0.830
csiE
PRD domain protein; KEGG: spy:SPy_1952 0.0044 hypothetical protein; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2553; csiE.
  
     0.710
panM
Acetyltransferase, GNAT family; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
 
     0.680
EHY69705.1
Hypothetical protein; KEGG: rhi:NGR_c09290 1.1e-18 lysyl-tRNA synthetase 2 K07027; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM0811; ybhN.
 
     0.625
flgA
Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
  
     0.603
yhjH
Cyclic diguanylate phosphodiesterase domain protein; KEGG: ccs:CCNA_00900 1.1e-07 CHASE4-family GGDEF/EAL protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3611; yhjH.
       0.516
ycfJ
Surface antigen; KEGG: sde:Sde_3351 8.4e-13 histidine kinase; Psort location: OuterMembrane, score: 9.93; locus tag in AE006468 is STM1212; ycfJ.
  
     0.481
EHY67514.1
Hypothetical protein; Locus tag in AE006468 is STM4531; yjiX.
  
     0.470
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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