STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67956.1Hypothetical protein; Locus tag in AE006468 is STM3648; yiaG. (96 aa)    
Predicted Functional Partners:
EHY67613.1
Toxin-antitoxin system, toxin component, RelE family; Psort location: Cytoplasmic, score: 8.96.
   
 
 0.650
EHY68364.1
Hypothetical protein; KEGG: pfo:Pfl01_3969 2.2e-05 vesicle-fusing ATPase; locus tag in AE006468 is STM2802; ygaM.
   
  
 0.636
elaB_2
Putative protein ElaB; KEGG: pfo:Pfl01_3969 7.0e-09 vesicle-fusing ATPase; locus tag in AE006468 is STM2311; elaB.
   
    0.612
ghoS
Hypothetical protein; Locus tag in AE006468 is STM1325; ydiZ.
   
  
 0.589
EHY69986.1
Putative acidic protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1153; msyB.
   
    0.579
ygaU
LysM domain protein; KEGG: atc:AGR_L_2132 0.0034 5'-nucleotidase; K01081 5'-nucleotidase; Psort location: Periplasmic, score: 9.83; locus tag in AE006468 is STM2795; ygaU.
   
    0.535
yqjC
Putative protein YqjC; KEGG: nam:NAMH_0317 1.7e-05 putative H+-transporting two-sector ATPase, B/B' subunit; K02109 F-type H+-transporting ATPase subunit b; locus tag in AE006468 is STM3228; yqjC.
   
    0.499
elaB_1
Hypothetical protein; KEGG: pfo:Pfl01_3969 5.5e-09 vesicle-fusing ATPase; locus tag in AE006468 is STM3229; yqjD.
   
    0.485
dps
Ferritin-like domain protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.
   
    0.483
yodD
Hypothetical protein; Locus tag in AE006468 is STM1984; yodD.
   
    0.479
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.