Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EHY68015.1 | hldD | SEHO0A_03768 | SEHO0A_03767 | KEGG: seh:SeHA_C4036 3.3e-185 rfaF; ADP-heptose:LPS heptosyltransferase II K02843; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3711; rfaF. | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 0.994 |
| EHY68015.1 | kbl | SEHO0A_03768 | SEHO0A_03766 | KEGG: seh:SeHA_C4036 3.3e-185 rfaF; ADP-heptose:LPS heptosyltransferase II K02843; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3711; rfaF. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.504 |
| EHY68015.1 | tdh | SEHO0A_03768 | SEHO0A_03765 | KEGG: seh:SeHA_C4036 3.3e-185 rfaF; ADP-heptose:LPS heptosyltransferase II K02843; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3711; rfaF. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.555 |
| EHY68849.1 | EHY69810.1 | SEHO0A_03345 | SEHO0A_00861 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | 0.991 |
| EHY68849.1 | ilvA | SEHO0A_03345 | SEHO0A_03967 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.994 |
| EHY68849.1 | nifJ | SEHO0A_03345 | SEHO0A_01604 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | 0.987 |
| EHY68849.1 | tdh | SEHO0A_03345 | SEHO0A_03765 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.990 |
| EHY69810.1 | EHY68849.1 | SEHO0A_00861 | SEHO0A_03345 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.991 |
| EHY69810.1 | ilvA | SEHO0A_00861 | SEHO0A_03967 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.991 |
| EHY69810.1 | kbl | SEHO0A_00861 | SEHO0A_03766 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.991 |
| EHY69810.1 | tdh | SEHO0A_00861 | SEHO0A_03765 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.990 |
| EHY69810.1 | ydfG | SEHO0A_00861 | SEHO0A_01438 | Glycine hydroxymethyltransferase; KEGG: see:SNSL254_A0969 3.9e-173 ltaE; low-specificity L-threonine aldolase K01620; locus tag in AE006468 is STM0934; ltaA. | Oxidoreductase, short chain dehydrogenase/reductase family protein; KEGG: sed:SeD_A1826 6.1e-129 3-hydroxy acid dehydrogenase K00540; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM1511; ydfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.991 |
| EHY71219.1 | tdh | SEHO0A_02302 | SEHO0A_03765 | Phosphotransferase system, EIIC; KEGG: sek:SSPA0608 6.8e-288 fructose-specific PTS system IIBC component; K02769 PTS system, fructose-specific IIB component K02770; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2204; fruA. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.760 |
| bioF | kbl | SEHO0A_00739 | SEHO0A_03766 | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.461 |
| bioF | tdh | SEHO0A_00739 | SEHO0A_03765 | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.759 |
| hldD | EHY68015.1 | SEHO0A_03767 | SEHO0A_03768 | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | KEGG: seh:SeHA_C4036 3.3e-185 rfaF; ADP-heptose:LPS heptosyltransferase II K02843; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3711; rfaF. | 0.994 |
| hldD | kbl | SEHO0A_03767 | SEHO0A_03766 | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.589 |
| hldD | nifJ | SEHO0A_03767 | SEHO0A_01604 | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | 0.919 |
| hldD | tdh | SEHO0A_03767 | SEHO0A_03765 | ADP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. | L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family. | 0.620 |
| ilvA | EHY68849.1 | SEHO0A_03967 | SEHO0A_03345 | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.994 |
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