STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dtdD-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa)    
Predicted Functional Partners:
yihY
YihY family protein; KEGG: sed:SeD_A4416 2.4e-150 rbn; ribonuclease BN K07058; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM4027; rbn.
  
    0.817
EHY67607.1
HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: sea:SeAg_B4259 3.8e-104 yihX; phosphatase K07025; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM4026; yihX.
  
    0.811
EHY67610.1
Thioesterase domain protein; KEGG: ecv:APECO1_2579 9.0e-167 yiiD; acetyltransferase; K00633 galactoside O-acetyltransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM4029; yiiD.
  
    0.809
EHY67611.1
Hypothetical protein.
       0.705
rbsK_3
Kinase, PfkB family; Phosphorylates 6-deoxy-6-sulfo-D-fructose (SF) to 6-deoxy-6- sulfo-D-fructose 1-phosphate (SFP); Belongs to the carbohydrate kinase PfkB family.
       0.458
yihW
Putative glycerol-3-phosphate regulon repressor; KEGG: sbc:SbBS512_E4348 6.7e-91 transcriptional regulator, DeoR/GntR family; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM4025; yihW.
       0.449
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
 0.435
EHY68519.1
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
    0.424
spoT
Guanosine 3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
    0.424
yieG
Inorganic anion transporter, sulfate permease family protein; KEGG: swp:swp_1190 6.2e-127 xanthine/uracil/vitamin C permease K06901; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3851; yieG.
      
 0.410
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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