STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhaAKEGG: ses:SARI_03601 3.1e-221 L-rhamnose isomerase; K01813 L-rhamnose isomerase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM4046; rhaA. (419 aa)    
Predicted Functional Partners:
rhaB
Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.
 
 
 0.999
rhaM
L-rhamnose 1-epimerase; Involved in the anomeric conversion of L-rhamnose.
 
 
 0.998
rhaD
Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.
 
  
 0.987
rhaT
RhaT L-rhamnose-proton symporter family protein; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.
 
  
 0.907
fucK
L-fuculokinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
  
 
 0.867
fucI
L-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose.
  
   
 0.762
xylB
Xylulokinase; KEGG: sei:SPC_3739 2.0e-263 xylB; xylulose kinase; K00854 xylulokinase; Psort location: CytoplasmicMembrane, score: 8.46; locus tag in AE006468 is STM3660; xylB.
  
 
 0.724
EHY67980.1
Carbohydrate kinase, FGGY family protein; KEGG: kpe:KPK_0162 1.7e-245 lyx; L-xylulose/3-keto-L-gulonate kinase K00880; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM3674; lyxK; Belongs to the FGGY kinase family.
  
 
 0.713
rhaS
AraC-like ligand binding domain protein; Activates expression of the rhaBAD and rhaT operons.
 
   
 0.698
fucO
Lactaldehyde reductase; KEGG: sew:SeSA_A4258 2.1e-190 fucO; lactaldehyde reductase; Psort location: Cytoplasmic, score: 9.26; locus tag in AE006468 is STM4044.
     
 0.646
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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