Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY67664.1 | btr | SEHO0A_04148 | SEHO0A_03737 | Hypothetical protein. | Transcriptional regulator, AraC family; KEGG: bcg:BCG9842_B1459 1.3e-06 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3678. | 0.404 |
EHY67664.1 | pheA | SEHO0A_04148 | SEHO0A_02780 | Hypothetical protein. | Chorismate mutase; KEGG: seg:SG2645 1.3e-199 pheA; bifunctional chorismate mutase/prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2667; pheA. | 0.418 |
EHY67664.1 | tyrA | SEHO0A_04148 | SEHO0A_02782 | Hypothetical protein. | Chorismate mutase; KEGG: spq:SPAB_03380 6.0e-193 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2669; tyrA. | 0.471 |
btr | EHY67664.1 | SEHO0A_03737 | SEHO0A_04148 | Transcriptional regulator, AraC family; KEGG: bcg:BCG9842_B1459 1.3e-06 adaA; Ada regulatory protein/6-O-methylguanine-DNA methyltransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3678. | Hypothetical protein. | 0.404 |
pheA | EHY67664.1 | SEHO0A_02780 | SEHO0A_04148 | Chorismate mutase; KEGG: seg:SG2645 1.3e-199 pheA; bifunctional chorismate mutase/prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2667; pheA. | Hypothetical protein. | 0.418 |
pheA | tyrA | SEHO0A_02780 | SEHO0A_02782 | Chorismate mutase; KEGG: seg:SG2645 1.3e-199 pheA; bifunctional chorismate mutase/prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2667; pheA. | Chorismate mutase; KEGG: spq:SPAB_03380 6.0e-193 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2669; tyrA. | 0.999 |
tyrA | EHY67664.1 | SEHO0A_02782 | SEHO0A_04148 | Chorismate mutase; KEGG: spq:SPAB_03380 6.0e-193 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2669; tyrA. | Hypothetical protein. | 0.471 |
tyrA | pheA | SEHO0A_02782 | SEHO0A_02780 | Chorismate mutase; KEGG: spq:SPAB_03380 6.0e-193 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase; K04092 chorismate mutase K04517; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2669; tyrA. | Chorismate mutase; KEGG: seg:SG2645 1.3e-199 pheA; bifunctional chorismate mutase/prephenate dehydratase; K04093 chorismate mutase K04518; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM2667; pheA. | 0.999 |