Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY67675.1 | EHY67676.1 | SEHO0A_04159 | SEHO0A_04160 | Hypothetical protein. | Hypothetical protein. | 0.432 |
EHY67675.1 | EHY67677.1 | SEHO0A_04159 | SEHO0A_04161 | Hypothetical protein. | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | 0.432 |
EHY67676.1 | EHY67675.1 | SEHO0A_04160 | SEHO0A_04159 | Hypothetical protein. | Hypothetical protein. | 0.432 |
EHY67676.1 | EHY67677.1 | SEHO0A_04160 | SEHO0A_04161 | Hypothetical protein. | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | 0.773 |
EHY67676.1 | yahA | SEHO0A_04160 | SEHO0A_04162 | Hypothetical protein. | Cyclic diguanylate phosphodiesterase domain protein; KEGG: noc:Noc_1271 4.1e-29 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88. | 0.506 |
EHY67677.1 | EHY67675.1 | SEHO0A_04161 | SEHO0A_04159 | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | Hypothetical protein. | 0.432 |
EHY67677.1 | EHY67676.1 | SEHO0A_04161 | SEHO0A_04160 | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | Hypothetical protein. | 0.773 |
EHY67677.1 | yahA | SEHO0A_04161 | SEHO0A_04162 | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | Cyclic diguanylate phosphodiesterase domain protein; KEGG: noc:Noc_1271 4.1e-29 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88. | 0.519 |
yahA | EHY67676.1 | SEHO0A_04162 | SEHO0A_04160 | Cyclic diguanylate phosphodiesterase domain protein; KEGG: noc:Noc_1271 4.1e-29 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88. | Hypothetical protein. | 0.506 |
yahA | EHY67677.1 | SEHO0A_04162 | SEHO0A_04161 | Cyclic diguanylate phosphodiesterase domain protein; KEGG: noc:Noc_1271 4.1e-29 hybrid signal transduction histidine kinase and diguanylate cyclase/phosphodiesterase; Psort location: CytoplasmicMembrane, score: 7.88. | Outer membrane autotransporter barrel domain protein; KEGG: bme:BMEII0148 2.7e-44 extracellular serine protease. | 0.519 |