STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67732.1Putative inner membrane protein; KEGG: vfi:VF_2437 6.9e-18 yijD; hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM4128; yijD. (119 aa)    
Predicted Functional Partners:
fabR
Transcriptional regulator, TetR family; Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer.
  
    0.803
frsA
Putative esterase FrsA; Displays esterase activity toward pNP-butyrate.
  
     0.771
yfhb
HAD superfamily hydrolase, YfhB; KEGG: ccs:CCNA_02001 9.6e-12 phosphoserine phosphatase; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM2569; yfhB.
  
     0.757
EHY68669.1
Hypothetical protein; Locus tag in AE006468 is STM3107; yggN.
  
     0.757
yfbU
YfbU domain protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM2335; yfbU; Belongs to the UPF0304 family.
  
     0.753
secM
Secretion monitor protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.739
ybgE
Cyd operon protein YbgE; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM0743; ybgE.
  
     0.739
SBOV06551
Hypothetical protein; Locus tag in AE006468 is STM0708; ybfA.
  
     0.738
EHY71526.1
Hypothetical protein; Locus tag in AE006468 is STM2447.
  
     0.738
SBOV01181
Hypothetical protein; Locus tag in AE006468 is STM0160; yacL; Belongs to the UPF0231 family.
  
     0.735
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.