STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67201.1Hypothetical protein; KEGG: dae:Dtox_0608 0.00024 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; locus tag in AE006468 is STM4250; yjbQ. (171 aa)    
Predicted Functional Partners:
yjbR_2
Hypothetical protein; Locus tag in AE006468 is STM4251; yjbR.
  
  
 0.979
EHY67546.1
Phospholipase, patatin family; Locus tag in AE006468 is STM4563; yjjU.
     
 0.813
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
    
 0.753
aphA
HAD superfamily phosphatase; KEGG: spt:SPA4066 1.2e-125 aphA; acid phosphatase/phosphotransferase K03788; locus tag in AE006468 is STM4249; aphA; Belongs to the class B bacterial acid phosphatase family.
       0.681
thiD
KEGG: sec:SC2161 9.7e-138 thiD; phosphomethylpyrimidine kinase; K00877 hydroxymethylpyrimidine kinase K00941; locus tag in AE006468 is STM2146; thiD.
   
 
 0.510
thiM
Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
     
 0.501
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
      
 0.473
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
     
 0.457
yjbR_1
Hypothetical protein; Locus tag in AE006468 is STM0579; ybdF.
  
  
 0.443
tyrB
Aromatic-amino-acid transaminase TyrB; KEGG: ses:SARI_03430 1.5e-203 aromatic amino acid aminotransferase; K00832 aromatic-amino-acid transaminase; Psort location: Cytoplasmic, score: 9.97; locus tag in AE006468 is STM4248; tyrB.
       0.443
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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