STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67306.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
hilC
Transcriptional regulator, AraC family; Locus tag in AE006468 is STM2867; hilC.
   
  
 0.842
EHY67309.1
Transcriptional regulator, AraC family.
   
  
 0.842
EHY67307.1
Hypothetical protein.
       0.568
EHY68430.1
Transcriptional regulator, AraC family; Locus tag in AE006468 is STM2875; hilD.
   
  
 0.541
EHY68448.1
Surface presentation of antigens protein; Locus tag in AE006468 is STM2892; invJ.
   
    0.493
barA
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein; KEGG: sei:SPC_3015 0. barA; sensor protein; K07678 two-component system, NarL family, sensor histidine kinase BarA; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM2958; barA.
     
 0.489
arcB
PAS domain S-box; KEGG: sei:SPC_3398 0. arcB; aerobic respiration control sensor protein; K07648 two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM3328; arcB.
     
 0.416
EHY68450.1
Invasion protein InvC; Locus tag in AE006468 is STM2894; invC.
   
    0.408
EHY68456.1
Psort location: OuterMembrane, score: 9.92; locus tag in AE006468 is STM2900; invH.
   
  
 0.407
invE
Type III secretion regulator YopN/LcrE/InvE/MxiC; Locus tag in AE006468 is STM2897; invE.
   
    0.400
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.