STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67372.1Integral membrane protein DUF6; Locus tag in AE006468 is STM4400; ytfF. (321 aa)    
Predicted Functional Partners:
leuE
Leucine efflux protein; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1270; yeaS.
      
 0.852
EHY70440.1
Integral membrane protein DUF6; KEGG: pmy:Pmen_3588 0.0057 two-component sensor kinase CbrA; Psort location: CytoplasmicMembrane, score: 10.00; locus tag in AE006468 is STM1571; yddG.
  
   
 0.852
ytfE
Iron-sulfur cluster repair di-iron protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters damaged by oxidative and nitrosative stress conditions.
       0.564
osmE
SmpA / OmlA family protein; Locus tag in AE006468 is STM1311; osmE.
  
     0.560
EHY67373.1
NmrA family protein; Locus tag in AE006468 is STM4401; ytfG.
       0.556
SBOV25411
Hypothetical protein; Locus tag in AE006468 is STM2476; ypfG.
  
     0.504
ygiN
Antibiotic biosynthesis monooxygenase; KEGG: ent:Ent638_4075 0.0076 L-rhamnose 1-epimerase; K03534 L-rhamnose mutarotase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3180; ygiN.
 
     0.498
ycfR
Hypothetical protein; KEGG: reu:Reut_B4338 0.0030 copper/zinc superoxide dismutase; K04565 Cu/Zn superoxide dismutase; locus tag in AE006468 is STM1214; ycfR.
  
     0.463
EHY68153.1
Hypothetical protein; KEGG: efe:EFER_3467 4.9e-08 acpT; 4'-phosphopantetheinyl transferase 2 K06133; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM3849; yieE.
  
     0.458
mdoB
Arylsulfatase; Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family.
  
     0.458
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.