Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EHY67446.1 | EHY67447.1 | SEHO0A_04571 | SEHO0A_04572 | Site-specific recombinase, phage integrase family. | Hypothetical protein. | 0.511 |
EHY67446.1 | EHY68145.1 | SEHO0A_04571 | SEHO0A_03898 | Site-specific recombinase, phage integrase family. | Zinc-binding domain of primase-helicase; KEGG: ecm:EcSMS35_4012 8.7e-43 nucleoside triphosphatase, D5 family; Psort location: Cytoplasmic, score: 8.96. | 0.637 |
EHY67446.1 | nifJ | SEHO0A_04571 | SEHO0A_01604 | Site-specific recombinase, phage integrase family. | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | 0.533 |
EHY67447.1 | EHY67446.1 | SEHO0A_04572 | SEHO0A_04571 | Hypothetical protein. | Site-specific recombinase, phage integrase family. | 0.511 |
EHY68145.1 | EHY67446.1 | SEHO0A_03898 | SEHO0A_04571 | Zinc-binding domain of primase-helicase; KEGG: ecm:EcSMS35_4012 8.7e-43 nucleoside triphosphatase, D5 family; Psort location: Cytoplasmic, score: 8.96. | Site-specific recombinase, phage integrase family. | 0.637 |
EHY68145.1 | nifJ | SEHO0A_03898 | SEHO0A_01604 | Zinc-binding domain of primase-helicase; KEGG: ecm:EcSMS35_4012 8.7e-43 nucleoside triphosphatase, D5 family; Psort location: Cytoplasmic, score: 8.96. | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | 0.524 |
nifJ | EHY67446.1 | SEHO0A_01604 | SEHO0A_04571 | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | Site-specific recombinase, phage integrase family. | 0.533 |
nifJ | EHY68145.1 | SEHO0A_01604 | SEHO0A_03898 | KEGG: sew:SeSA_A1770 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737; Psort location: CytoplasmicMembrane, score: 9.82; locus tag in AE006468 is STM1651; nifJ. | Zinc-binding domain of primase-helicase; KEGG: ecm:EcSMS35_4012 8.7e-43 nucleoside triphosphatase, D5 family; Psort location: Cytoplasmic, score: 8.96. | 0.524 |