STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHY67509.1N-6 DNA Methylase. (489 aa)    
Predicted Functional Partners:
EHY67508.1
Type I restriction modification DNA specificity domain protein.
 
 0.999
EHY67510.1
DEAD/DEAH box helicase.
 
   
 0.916
EHY67511.1
Restriction endonuclease.
 
  
 0.892
EHY69289.1
KEGG: sec:SC0398 0. mod; DNA methylase; restriction system; K07316 adenine-specific DNA-methyltransferase; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0357; mod.
 
   
 0.858
smrA
Smr domain protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM1658; ydaL.
      
 0.826
EHY69815.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96; locus tag in AE006468 is STM0939; ybjD.
  
  
 0.752
glcR_3
DeoR-like helix-turn-helix protein; KEGG: lcb:LCABL_29260 7.0e-25 nadD; nicotinic acid mononucleotide adenyltransferase K02444; Psort location: Cytoplasmic, score: 8.96.
   
    0.577
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
    
 
 0.487
yhdJ
DNA (cytosine-5-)-methyltransferase; KEGG: sty:STY3566 2.9e-152 yhdJ; putative methyltransferase K07319; locus tag in AE006468 is STM3386; yhdJ; Belongs to the N(4)/N(6)-methyltransferase family.
 
   
 0.426
guaA
GMP synthase protein; Catalyzes the synthesis of GMP from XMP.
     
 0.412
Your Current Organism:
Salmonella enterica houtenae
NCBI taxonomy Id: 523831
Other names: S. enterica subsp. houtenae str. ATCC BAA-1581, Salmonella enterica subsp. houtenae str. ATCC BAA-1581
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