STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HFX_0136Hypothetical protein. (330 aa)    
Predicted Functional Partners:
kefB
Sodium/protn antiporter putative.
  
    0.770
tnpR
Resolvase.
  
    0.696
HFX_0572
Cobalamine operon protein, hydrolase.
  
     0.615
mgtE2
Mg2+ transporter.
 
     0.611
flgB3
Flagellin B3; Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
     0.606
HFX_1938
Hypothetical protein.
  
    0.601
mgtE
Divalent cation transporter, subunit II, MgtE family protein.
 
     0.595
HFX_1137
Hypothetical protein.
  
     0.566
HFX_2114
Hypothetical protein.
  
     0.552
artA
Hypothetical protein.
  
    0.549
Your Current Organism:
Haloferax mediterranei
NCBI taxonomy Id: 523841
Other names: H. mediterranei ATCC 33500, Haloferax mediterranei ATCC 33500, Haloferax mediterranei CGMCC 1.2087, Haloferax mediterranei JCM 8866, Haloferax mediterranei R-4, Haloferax mediterranei str. ATCC 33500, Haloferax mediterranei strain ATCC 33500
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.