Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HFX_0255 | bcp-2 | HFX_0255 | HFX_0257 | CBS domain-containing protein. | Peroxiredoxin-like protein. | 0.505 |
HFX_0255 | gst2 | HFX_0255 | HFX_0256 | CBS domain-containing protein. | Glutathione S-transferase. | 0.596 |
HFX_0255 | nuoCD | HFX_0255 | HFX_0978 | CBS domain-containing protein. | NADH dehydrogenase, subunit CD (ubiquinone). | 0.400 |
HFX_0255 | nuoD | HFX_0255 | HFX_0966 | CBS domain-containing protein. | NADH dehydrogenase, subunit D (ubiquinone). | 0.400 |
HFX_0255 | purH | HFX_0255 | HFX_1093 | CBS domain-containing protein. | Bifunctional purine biosynthesis protein PurH. | 0.511 |
bcp-2 | HFX_0255 | HFX_0257 | HFX_0255 | Peroxiredoxin-like protein. | CBS domain-containing protein. | 0.505 |
bcp-2 | gst2 | HFX_0257 | HFX_0256 | Peroxiredoxin-like protein. | Glutathione S-transferase. | 0.877 |
gst2 | HFX_0255 | HFX_0256 | HFX_0255 | Glutathione S-transferase. | CBS domain-containing protein. | 0.596 |
gst2 | bcp-2 | HFX_0256 | HFX_0257 | Glutathione S-transferase. | Peroxiredoxin-like protein. | 0.877 |
nuoCD | HFX_0255 | HFX_0978 | HFX_0255 | NADH dehydrogenase, subunit CD (ubiquinone). | CBS domain-containing protein. | 0.400 |
nuoCD | nuoD | HFX_0978 | HFX_0966 | NADH dehydrogenase, subunit CD (ubiquinone). | NADH dehydrogenase, subunit D (ubiquinone). | 0.999 |
nuoD | HFX_0255 | HFX_0966 | HFX_0255 | NADH dehydrogenase, subunit D (ubiquinone). | CBS domain-containing protein. | 0.400 |
nuoD | nuoCD | HFX_0966 | HFX_0978 | NADH dehydrogenase, subunit D (ubiquinone). | NADH dehydrogenase, subunit CD (ubiquinone). | 0.999 |
purH | HFX_0255 | HFX_1093 | HFX_0255 | Bifunctional purine biosynthesis protein PurH. | CBS domain-containing protein. | 0.511 |