Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HFX_0610 | HFX_0611 | HFX_0610 | HFX_0611 | Hypothetical protein. | Hypothetical protein. | 0.849 |
HFX_0610 | HFX_0612 | HFX_0610 | HFX_0612 | Hypothetical protein. | Hypothetical protein. | 0.838 |
HFX_0611 | HFX_0610 | HFX_0611 | HFX_0610 | Hypothetical protein. | Hypothetical protein. | 0.849 |
HFX_0611 | HFX_0612 | HFX_0611 | HFX_0612 | Hypothetical protein. | Hypothetical protein. | 0.824 |
HFX_0612 | HFX_0610 | HFX_0612 | HFX_0610 | Hypothetical protein. | Hypothetical protein. | 0.838 |
HFX_0612 | HFX_0611 | HFX_0612 | HFX_0611 | Hypothetical protein. | Hypothetical protein. | 0.824 |
HFX_0612 | HFX_1264 | HFX_0612 | HFX_1264 | Hypothetical protein. | Hypothetical protein. | 0.514 |
HFX_0612 | HFX_2038 | HFX_0612 | HFX_2038 | Hypothetical protein. | Transglutaminase-like enzyme, predicted cysteine protease. | 0.683 |
HFX_0612 | HFX_2230 | HFX_0612 | HFX_2230 | Hypothetical protein. | Hypothetical protein. | 0.583 |
HFX_0612 | moxR | HFX_0612 | HFX_2035 | Hypothetical protein. | MoxR-like ATPase. | 0.546 |
HFX_0612 | moxR2 | HFX_0612 | HFX_0613 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.568 |
HFX_0612 | moxR4 | HFX_0612 | HFX_1265 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.570 |
HFX_0612 | moxR6 | HFX_0612 | HFX_2227 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.577 |
HFX_1264 | HFX_0612 | HFX_1264 | HFX_0612 | Hypothetical protein. | Hypothetical protein. | 0.514 |
HFX_1264 | HFX_2038 | HFX_1264 | HFX_2038 | Hypothetical protein. | Transglutaminase-like enzyme, predicted cysteine protease. | 0.581 |
HFX_1264 | moxR | HFX_1264 | HFX_2035 | Hypothetical protein. | MoxR-like ATPase. | 0.517 |
HFX_1264 | moxR2 | HFX_1264 | HFX_0613 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.486 |
HFX_1264 | moxR4 | HFX_1264 | HFX_1265 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.939 |
HFX_1264 | moxR6 | HFX_1264 | HFX_2227 | Hypothetical protein. | Methanol dehydrogenase regulatory protein. | 0.530 |
HFX_2038 | HFX_0612 | HFX_2038 | HFX_0612 | Transglutaminase-like enzyme, predicted cysteine protease. | Hypothetical protein. | 0.683 |
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