STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phaAbPHA-specific beta-ketothiolase beta subunit. (124 aa)    
Predicted Functional Partners:
phaAa
PHA-specific beta-ketothiolase alpha subunit.
  
 
 0.990
mvaB
hydroxymethylglutaryl-CoA synthase.
  
 
 0.934
paaJ
acetyl-CoA C-acyltransferase.
  
 
 0.867
paaJ-2
acetyl-CoA C-ac(et)yltransferase.
  
 
 0.862
phaC1
Poly(3-hydroxyalkanoate) synthase subunit PhaC.
  
  
 0.619
HFX_1024
Hypothetical protein.
       0.585
HFX_2426
Transcriptional regulator.
  
    0.501
phaJ
(R)-specific enoyl -CoA hydratase.
  
   0.428
paaG-2
enoyl-CoA hydratase / molybdenum cofactor biosynthesis protein.
  
   0.428
maoC3
maoC family protein.
  
   0.428
Your Current Organism:
Haloferax mediterranei
NCBI taxonomy Id: 523841
Other names: H. mediterranei ATCC 33500, Haloferax mediterranei ATCC 33500, Haloferax mediterranei CGMCC 1.2087, Haloferax mediterranei JCM 8866, Haloferax mediterranei R-4, Haloferax mediterranei str. ATCC 33500, Haloferax mediterranei strain ATCC 33500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.