Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
HFX_1329 | HFX_1330 | Phage PhiH1 repressor protein. | Hypothetical protein. | 0.501 |
HFX_1329 | HFX_1331 | Phage PhiH1 repressor protein. | DNA binding domain-containing protein. | 0.501 |
HFX_1329 | HFX_1332 | Phage PhiH1 repressor protein. | Hypothetical protein. | 0.404 |
HFX_1329 | HFX_1333 | Phage PhiH1 repressor protein. | Hypothetical protein. | 0.404 |
HFX_1329 | HFX_1334 | Phage PhiH1 repressor protein. | Hypothetical protein. | 0.404 |
HFX_1329 | HFX_1335 | Phage PhiH1 repressor protein. | Phage integrase/site-specific recombinase. | 0.404 |
HFX_1330 | HFX_1329 | Hypothetical protein. | Phage PhiH1 repressor protein. | 0.501 |
HFX_1330 | HFX_1331 | Hypothetical protein. | DNA binding domain-containing protein. | 0.773 |
HFX_1330 | HFX_1332 | Hypothetical protein. | Hypothetical protein. | 0.605 |
HFX_1330 | HFX_1333 | Hypothetical protein. | Hypothetical protein. | 0.605 |
HFX_1330 | HFX_1334 | Hypothetical protein. | Hypothetical protein. | 0.605 |
HFX_1330 | HFX_1335 | Hypothetical protein. | Phage integrase/site-specific recombinase. | 0.605 |
HFX_1331 | HFX_1329 | DNA binding domain-containing protein. | Phage PhiH1 repressor protein. | 0.501 |
HFX_1331 | HFX_1330 | DNA binding domain-containing protein. | Hypothetical protein. | 0.773 |
HFX_1331 | HFX_1332 | DNA binding domain-containing protein. | Hypothetical protein. | 0.605 |
HFX_1331 | HFX_1333 | DNA binding domain-containing protein. | Hypothetical protein. | 0.605 |
HFX_1331 | HFX_1334 | DNA binding domain-containing protein. | Hypothetical protein. | 0.605 |
HFX_1331 | HFX_1335 | DNA binding domain-containing protein. | Phage integrase/site-specific recombinase. | 0.605 |
HFX_1332 | HFX_1329 | Hypothetical protein. | Phage PhiH1 repressor protein. | 0.404 |
HFX_1332 | HFX_1330 | Hypothetical protein. | Hypothetical protein. | 0.605 |
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