STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porBPyruvate--ferredoxin oxidoreductase, beta subunit. (312 aa)    
Predicted Functional Partners:
porA
Pyruvate--ferredoxin oxidoreductase, alpha subunit.
 
 0.999
korA
2-oxoglutarate ferredoxin oxidoreductase, subunit alpha.
 
 0.997
HFX_0998
acyl-CoA synthetase, acetate--CoA ligase-like protein (ADP-forming).
    
 0.948
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.925
citZ
Citrate (si)-synthase.
   
 
 0.923
pdhC
Dihydrolipoamide S-acyltransferase (pyruvate dehydrogenase E2 component).
   
 
 0.922
pdhD
Dihydrolipoamide dehydrogenase.
    
 0.919
pps1
Phosphoenolpyruvate synthase / pyruvate, water dikinase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.917
pdhB1
Pyruvate dehydrogenase E1 component subunit beta.
    
 0.916
ilvB
Acetolactate synthase I/II/III large subunit.
  
 
 0.915
Your Current Organism:
Haloferax mediterranei
NCBI taxonomy Id: 523841
Other names: H. mediterranei ATCC 33500, Haloferax mediterranei ATCC 33500, Haloferax mediterranei CGMCC 1.2087, Haloferax mediterranei JCM 8866, Haloferax mediterranei R-4, Haloferax mediterranei str. ATCC 33500, Haloferax mediterranei strain ATCC 33500
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