Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HFX_2044 | HFX_2045 | HFX_2044 | HFX_2045 | Hypothetical protein. | Hypothetical protein. | 0.795 |
HFX_2044 | HFX_2046 | HFX_2044 | HFX_2046 | Hypothetical protein. | Hypothetical protein. | 0.411 |
HFX_2044 | nudF | HFX_2044 | HFX_2043 | Hypothetical protein. | ADP-ribose pyrophosphatase, Mut/nudix family protein. | 0.840 |
HFX_2044 | pspE-2 | HFX_2044 | HFX_2042 | Hypothetical protein. | Putative rhodanese. | 0.792 |
HFX_2044 | rimI | HFX_2044 | HFX_2048 | Hypothetical protein. | Ribosomal-protein-alanine N-acetyltransferase. | 0.482 |
HFX_2045 | HFX_2044 | HFX_2045 | HFX_2044 | Hypothetical protein. | Hypothetical protein. | 0.795 |
HFX_2045 | HFX_2046 | HFX_2045 | HFX_2046 | Hypothetical protein. | Hypothetical protein. | 0.450 |
HFX_2045 | nudF | HFX_2045 | HFX_2043 | Hypothetical protein. | ADP-ribose pyrophosphatase, Mut/nudix family protein. | 0.753 |
HFX_2045 | pspE-2 | HFX_2045 | HFX_2042 | Hypothetical protein. | Putative rhodanese. | 0.715 |
HFX_2045 | rimI | HFX_2045 | HFX_2048 | Hypothetical protein. | Ribosomal-protein-alanine N-acetyltransferase. | 0.491 |
HFX_2046 | HFX_2044 | HFX_2046 | HFX_2044 | Hypothetical protein. | Hypothetical protein. | 0.411 |
HFX_2046 | HFX_2045 | HFX_2046 | HFX_2045 | Hypothetical protein. | Hypothetical protein. | 0.450 |
HFX_2046 | nudF | HFX_2046 | HFX_2043 | Hypothetical protein. | ADP-ribose pyrophosphatase, Mut/nudix family protein. | 0.411 |
HFX_2046 | pspE-2 | HFX_2046 | HFX_2042 | Hypothetical protein. | Putative rhodanese. | 0.411 |
nudF | HFX_2044 | HFX_2043 | HFX_2044 | ADP-ribose pyrophosphatase, Mut/nudix family protein. | Hypothetical protein. | 0.840 |
nudF | HFX_2045 | HFX_2043 | HFX_2045 | ADP-ribose pyrophosphatase, Mut/nudix family protein. | Hypothetical protein. | 0.753 |
nudF | HFX_2046 | HFX_2043 | HFX_2046 | ADP-ribose pyrophosphatase, Mut/nudix family protein. | Hypothetical protein. | 0.411 |
nudF | pspE-2 | HFX_2043 | HFX_2042 | ADP-ribose pyrophosphatase, Mut/nudix family protein. | Putative rhodanese. | 0.822 |
pspE-2 | HFX_2044 | HFX_2042 | HFX_2044 | Putative rhodanese. | Hypothetical protein. | 0.792 |
pspE-2 | HFX_2045 | HFX_2042 | HFX_2045 | Putative rhodanese. | Hypothetical protein. | 0.715 |
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