Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
galE-3Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase). (307 aa)    
Predicted Functional Partners:
galE
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase).
  
  
 
0.913
galE-2
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase).
  
  
 
0.900
rffH1
Glucose-1-phosphate thymidylyltransferase.
 
 0.900
graD
Sugar nucleotidyltransferase (glucose-1-phosphate thymidylyltransferase).
 
 0.896
graD5
Glucose-1-phosphate thymidylyltransferase.
 
 0.896
manC
Mannose-1-phosphate guanylyltransferase.
 
 
 0.854
rps3P
30S ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
  0.758
rps19
30S ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.754
rps3AR
30S ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.752
rps28E
30S ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
   
  0.722
Your Current Organism:
Haloferax mediterranei
NCBI taxonomy Id: 523841
Other names: H. mediterranei ATCC 33500, Haloferax mediterranei ATCC 33500, Haloferax mediterranei CGMCC 1.2087, Haloferax mediterranei JCM 8866, Haloferax mediterranei R-4, Haloferax mediterranei str. ATCC 33500, Haloferax mediterranei strain ATCC 33500
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