STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH29181.1Uncharacterized conserved protein. (403 aa)    
Predicted Functional Partners:
SMH29182.1
Putative ABC transport system permease protein.
 
     0.788
SMH29180.1
Putative ABC transport system ATP-binding protein.
       0.764
SMH29188.1
Phospholipase_D-nuclease N-terminal.
       0.738
SMH43650.1
Phosphoglycerate mutase.
  
     0.719
SMH33724.1
S-layer family duplication domain-containing protein.
  
     0.709
SMH43629.1
N-terminal double-transmembrane domain-containing protein.
  
     0.690
SMH35316.1
Hypothetical protein.
  
     0.676
SMH43605.1
Von Willebrand factor type A domain-containing protein.
  
     0.673
SMH29190.1
Putative sensor.
       0.655
pfkC
ADP-dependent phosphofructokinase; Catalyzes the phosphorylation of fructose 6-phosphate to fructose 1,6-bisphosphate using ADP as the phosphate donor.
  
     0.637
Your Current Organism:
Methanohalophilus portucalensis
NCBI taxonomy Id: 523843
Other names: M. portucalensis FDF-1, Methanohalophilus portucalensis DSM 7471, Methanohalophilus portucalensis FDF-1, Methanohalophilus portucalensis str. FDF-1, Methanohalophilus portucalensis strain FDF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.