STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH33631.1YycH protein. (131 aa)    
Predicted Functional Partners:
SMH44476.1
PGF-CTERM protein/PGF-pre-PGF domain-containing protein/TIGR04279 methanogen extracellular domain-containing protein.
    
  0.930
SMH44461.1
PGF-pre-PGF domain-containing protein.
    
 0.910
SMH28356.1
PGF-pre-PGF domain-containing protein.
    
 0.891
SMH39515.1
PGF-pre-PGF domain-containing protein.
    
 0.891
SMH34684.1
Protein of unknown function.
    
  0.889
SMH33630.1
Hypothetical protein.
       0.678
SMH37039.1
Hypothetical protein.
    
  0.616
SMH33652.1
Phospholipase_D-nuclease N-terminal.
       0.579
SMH33661.1
Hypothetical protein.
       0.547
SMH33629.1
Hypothetical protein.
       0.510
Your Current Organism:
Methanohalophilus portucalensis
NCBI taxonomy Id: 523843
Other names: M. portucalensis FDF-1, Methanohalophilus portucalensis DSM 7471, Methanohalophilus portucalensis FDF-1, Methanohalophilus portucalensis str. FDF-1, Methanohalophilus portucalensis strain FDF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.