STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH43042.1cation:H+ antiporter. (317 aa)    
Predicted Functional Partners:
SMH38115.1
Sodium/proton antiporter, CPA1 family.
 
 
 0.787
SMH43039.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.664
SMH43017.1
TIGR00267 family protein.
 
   
 0.643
SMH29722.1
Multisubunit sodium/proton antiporter, MrpA subunit.
     
 0.598
SMH43044.1
DNA-binding transcriptional regulator, Lrp family.
       0.504
dtdA
D-aminoacyl-tRNA deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo.
  
  
 0.489
SMH35391.1
Solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5.
 
  
 0.489
thrS
threonyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
   
 0.413
SMH43014.1
Response regulator receiver domain-containing protein.
       0.412
SMH43047.1
Hypothetical protein.
     
 0.406
Your Current Organism:
Methanohalophilus portucalensis
NCBI taxonomy Id: 523843
Other names: M. portucalensis FDF-1, Methanohalophilus portucalensis DSM 7471, Methanohalophilus portucalensis FDF-1, Methanohalophilus portucalensis str. FDF-1, Methanohalophilus portucalensis strain FDF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.