STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH45233.1CBS domain-containing protein. (279 aa)    
Predicted Functional Partners:
SMH45237.1
CBS domain-containing protein.
 
     0.899
SMH45226.1
CBS domain-containing protein.
 
     0.887
SMH45207.1
Putative ATP-dependent DNA ligase.
 
     0.778
SMH45253.1
CBS domain-containing protein.
 
    0.771
SMH45248.1
CBS domain-containing protein.
 
    
0.697
SMH44251.1
Hydroxyacylglutathione hydrolase.
 
 
 
 0.649
SMH45187.1
Selenocysteine-specific translation elongation factor.
     
 0.621
SMH33063.1
Glutathione reductase (NADPH); Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.608
SMH40339.1
Dihydrolipoamide dehydrogenase; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.608
SMH35199.1
Rhodanese-related sulfurtransferase.
   
 
 0.594
Your Current Organism:
Methanohalophilus portucalensis
NCBI taxonomy Id: 523843
Other names: M. portucalensis FDF-1, Methanohalophilus portucalensis DSM 7471, Methanohalophilus portucalensis FDF-1, Methanohalophilus portucalensis str. FDF-1, Methanohalophilus portucalensis strain FDF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.