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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nifHNitrogenase reductase-like protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family. (299 aa)    
Predicted Functional Partners:
AKB11846.1
Nitrogenase vanadium-cofactor synthesis protein VnfE.
 
 0.958
AKB11847.1
Nitrogenase vanadium-cofactor synthesis protein VnfN.
 
 
 0.954
AKB11851.1
Nitrogenase vanadium-cofactor synthesis protein VnfE; Belongs to the NifD/NifK/NifE/NifN family.
 
 0.947
AKB11852.1
Nitrogenase vanadium-cofactor synthesis protein VnfN.
 
 
 0.939
AKB13320.1
Glutamine synthetase type I.
   
 
 0.924
AKB12440.1
Glutamine synthetase type I.
   
 
 0.919
AKB12117.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
AKB12781.1
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.904
AKB14208.1
Nitrogenase-related protein.
 
 
 0.860
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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