Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB11852.1Nitrogenase vanadium-cofactor synthesis protein VnfN. (435 aa)    
Predicted Functional Partners:
AKB11851.1
Nitrogenase vanadium-cofactor synthesis protein VnfE; Belongs to the NifD/NifK/NifE/NifN family.
 
 
0.954
nifH
Nitrogenase reductase-like protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 
 0.949
AKB14209.1
Nitrogenase reductase-like protein.
 
 
 0.946
AKB12440.1
Glutamine synthetase type I.
   
 
 0.923
AKB13320.1
Glutamine synthetase type I.
   
 
 0.923
AKB11846.1
Nitrogenase vanadium-cofactor synthesis protein VnfE.
 
 
0.910
AKB12117.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.905
AKB12781.1
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.905
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.902
AKB14050.1
Nitrogenase FeMo-cofactor synthesis FeS core scaffold and assembly protein NifB.
 
  
 0.749
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.