Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB12142.1Putative ankyrin repeat protein. (305 aa)    
Predicted Functional Partners:
AKB12630.1
WD-domain containing protein.
 
 0.978
AKB11926.1
Hypothetical protein.
 
 0.945
dnaK
Chaperone protein DnaK; Acts as a chaperone.
   
 0.944
AKB12599.1
GTPase Era.
  
 0.926
AKB12300.1
Putative ATPase.
 
 0.921
AKB11903.1
Serine/threonine protein phosphatase BSU1.
 
 
 0.918
smc
Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
 0.918
AKB12322.1
Hypothetical protein.
 
 
 0.916
AKB12054.1
Mov34 family protein.
   
 0.906
AKB13947.1
Putative serine/threonine protein phosphatase.
   
 0.904
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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