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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12204.1Sensory transduction histidine kinase. (844 aa)    
Predicted Functional Partners:
AKB13590.1
Two-component response regulator.
 
 
 0.900
AKB12202.1
Sensory transduction histidine kinase.
   
 0.829
AKB12203.1
Sensory transduction histidine kinase.
 
   
 0.828
AKB13128.1
Sensory transduction histidine kinase.
 
 
0.744
AKB13514.1
Sensory transduction histidine kinase.
 
 
 0.692
AKB12753.1
Two-component system response regulator.
 
 
 
 0.676
dnaK
Chaperone protein DnaK; Acts as a chaperone.
   
 0.641
AKB12354.1
Sensory transduction histidine kinase.
 
 
 
0.636
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P).
  
 0.628
AKB13515.1
Two-component response regulator.
 
 
 
 0.612
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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