Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB12242.1Response regulator receiver. (157 aa)    
Predicted Functional Partners:
AKB13590.1
Two-component response regulator.
 
 
 0.855
AKB12754.1
Sensory transduction histidine kinase.
 
   
 0.698
AKB12207.1
Sensory transduction histidine kinase.
 
   
 0.681
AKB12205.1
Sensory transduction histidine kinase.
 
   
 0.678
AKB12491.1
Sensory transduction histidine kinase.
   
 0.676
AKB13953.1
Sensory transduction histidine kinase.
 
   
 0.667
AKB13950.1
Sensory transduction histidine kinase.
 
   
 0.657
AKB11988.1
Sensory transduction histidine kinase.
 
   
 0.642
AKB13886.1
Sensory transduction histidine kinase.
 
     0.633
AKB12611.1
Response regulator receiver.
 
 
 
 0.631
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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