Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB12248.1Dimethylamine methyltransferase corrinoid protein. (216 aa)    
Predicted Functional Partners:
AKB12247.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.979
AKB13686.1
Methylcobalamin:coenzyme M methyltransferase, methylamine-specific.
 
 
 0.942
AKB13120.1
Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing; Belongs to the trimethylamine methyltransferase family.
 
 
 0.931
AKB13119.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.912
AKB13825.1
Dimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
    
 0.912
AKB13820.1
Dimethylamine methyltransferase corrinoid protein.
  
  
 
0.901
AKB13118.1
Dimethylamine methyltransferase corrinoid protein.
  
  
 
0.900
AKB13821.1
Trimethylamine:corrinoid methyltransferase; Pyrrolysine-containing.
 
 
 
 0.813
AKB11840.1
Methylcobalamin:coenzyme M methyltransferase, methanol-specific.
 
 
 0.778
AKB12967.1
Methylcobamide:CoM methyltransferase MtaA.
 
 
 0.778
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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