Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB12439.1Flavodoxin. (394 aa)    
Predicted Functional Partners:
AKB12569.1
Rubrerythrin.
 
  
 0.841
AKB12118.1
Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule.
 
  
 0.765
AKB12716.1
Rubrerythrin.
 
  
 0.714
AKB14143.1
Hypothetical protein.
      
 0.712
AKB13787.1
Alkyl hydroperoxide reductase subunit C-like protein.
 
   
 0.632
AKB13695.1
Ferritin-like protein 2.
  
  
 0.590
AKB13562.1
Coenzyme A disulfide reductase.
    
 0.588
AKB14283.1
2-oxoglutarate oxidoreductase, beta subunit.
  
    0.528
AKB14284.1
2-oxoglutarate oxidoreductase, alpha subunit.
  
  
 0.525
AKB12846.1
Thioredoxin.
  
  
 0.474
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.