STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12440.1Glutamine synthetase type I. (506 aa)    
Predicted Functional Partners:
AKB14118.1
Glutamate synthase [NADPH] small chain.
  
 
 0.964
glmS
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
 
 
 0.947
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
 0.931
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.931
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.927
AKB11846.1
Nitrogenase vanadium-cofactor synthesis protein VnfE.
   
 
 0.926
AKB11847.1
Nitrogenase vanadium-cofactor synthesis protein VnfN.
   
 
 0.926
AKB11851.1
Nitrogenase vanadium-cofactor synthesis protein VnfE; Belongs to the NifD/NifK/NifE/NifN family.
   
 
 0.926
AKB11852.1
Nitrogenase vanadium-cofactor synthesis protein VnfN.
   
 
 0.926
AKB13320.1
Glutamine synthetase type I.
  
  
 
0.920
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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