Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB12451.1Lactoylglutathione lyase and related lyase. (130 aa)    
Predicted Functional Partners:
AKB11964.1
NADH-quinone oxidoreductase subunit C/D.
  
  
 0.504
AKB11965.1
NADH-quinone oxidoreductase subunit C/D.
  
  
 0.504
AKB11962.1
Ketoisovalerate oxidoreductase subunit VorD.
  
  
 0.493
AKB14059.1
Energy-conserving hydrogenase (ferredoxin), subunit F.
  
  
 0.493
AKB13590.1
Two-component response regulator.
  
  
 0.486
AKB12452.1
Hypothetical protein.
     
 0.475
AKB12621.1
Succinate dehydrogenase iron-sulfur protein.
  
  
 0.446
AKB12111.1
Ferredoxin.
  
  
 0.424
AKB12229.1
Nitroreductase.
  
  
 0.424
AKB12423.1
Hypothetical protein.
  
  
 0.424
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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