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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12501.1ATP synthase epsilon chain. (134 aa)    
Predicted Functional Partners:
AKB12504.1
Sodium-transporting ATPase subunit B.
 
  
  0.993
AKB12506.1
ATP synthase B chain.
 
  
  0.989
AKB12505.1
Sodium-transporting ATPase subunit E.
 
  
  0.986
AKB12500.1
ATP synthase beta chain.
 
  
  0.980
AKB12508.1
Sodium-transporting ATPase subunit G.
 
  
  0.980
AKB12502.1
Sodium-transporting ATPase subunit I.
 
     0.945
AKB12507.1
Sodium-transporting ATPase subunit A.
 
  
  0.945
AKB12503.1
ATP synthase protein I.
 
     0.944
AKB12540.1
Inorganic pyrophosphatase.
     
  0.650
ppa
Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.
     
  0.650
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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