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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12519.1Pyruvate:ferredoxin oxidoreductase, beta subunit. (296 aa)    
Predicted Functional Partners:
AKB13601.1
Pyruvate:ferredoxin oxidoreductase, alpha subunit.
 0.999
AKB13602.1
Pyruvate:ferredoxin oxidoreductase, delta subunit.
 
 0.998
AKB13603.1
Pyruvate:ferredoxin oxidoreductase, gamma subunit.
 
 0.997
AKB14284.1
2-oxoglutarate oxidoreductase, alpha subunit.
 
 0.987
AKB11885.1
CO dehydrogenase iron-sulfur protein CooF.
  
 
 0.974
AKB12585.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
  
 
 0.925
cdhC
CO dehydrogenase/acetyl-CoA synthase subunit beta, acetyl-CoA synthase; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron- sulfur protein (the gamma-delta complex).
  
 
 0.924
AKB13796.1
Citrate synthase (si).
  
 
 0.923
AKB14072.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.923
cdhE
5-tetrahydromethanopterin:corrinoid iron-sulfur protein methyltransferase; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy.
  
 
 0.922
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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