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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12532.1Cell surface protein. (114 aa)    
Predicted Functional Partners:
AKB12692.1
Phospholipid-binding protein.
  
 
 0.707
AKB12273.1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.671
AKB13796.1
Citrate synthase (si).
    
 
 0.637
AKB13532.1
GTP-binding protein RBG1/RBG2.
    
   0.626
AKB12883.1
Peptidase S8 and S53, subtilisin, kexin, sedolisin.
 
 
 0.615
AKB13901.1
Hypothetical protein.
 
     0.567
AKB12531.1
Hypothetical protein.
      0.545
AKB11926.1
Hypothetical protein.
  
 0.505
AKB13109.1
Serine protease.
 
 
 0.472
AKB12221.1
Hypothetical protein; Belongs to the peptidase S8 family.
 
 
 0.422
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
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