STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB12545.1Hypothetical protein. (556 aa)    
Predicted Functional Partners:
AKB14157.1
Long-chain-fatty-acid--CoA ligase.
 
 
 
 0.684
AKB12481.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.636
AKB12697.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.636
AKB12956.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.636
AKB14158.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.636
dtdA
D-tyrosyl-tRNA(Tyr) deacylase; D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo.
 
   
 0.596
AKB14043.1
Protein F12M16.25.
 
   
 0.559
AKB12050.1
S-D-lactoylglutathione methylglyoxal lyase.
 
  
 0.553
AKB12544.1
ThiJ/PfpI family protein.
  
  
 0.548
AKB13699.1
Hypothetical protein.
  
  
 0.515
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.