Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB12558.1Biotin synthase-related enzyme. (267 aa)    
Predicted Functional Partners:
AKB14133.1
Hypothetical protein.
 
     0.733
AKB11932.1
OB-fold nucleic acid binding domain protein.
 
     0.633
AKB14046.1
COG4004 family.
  
     0.584
AKB12561.1
Hypothetical protein.
 
     0.578
AKB12564.1
Hypothetical protein.
 
     0.578
AKB13621.1
Putative transcriptional regulator with an HTH domain protein.
  
     0.570
AKB14077.1
Hypothetical protein.
  
     0.541
AKB12098.1
Hypothetical protein.
 
     0.540
AKB11869.1
Hypothetical protein.
  
     0.513
AKB13206.1
Hypothetical protein.
  
     0.503
Your Current Organism:
Methanosarcina thermophila
NCBI taxonomy Id: 523844
Other names: M. thermophila TM-1, Methanosarcina thermophila OCM 12, Methanosarcina thermophila TM-1, Methanosarcina thermophila str. TM-1, Methanosarcina thermophila strain TM-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.